Question

When you order primers, they are delivered as dried (lyophilized) DNA in an Eppendorf tube. You...

When you order primers, they are delivered as dried (lyophilized) DNA in an Eppendorf tube. You must then dilute these primers with molecular biology grade water to an appropriate concentration. Typically, the primer tube simply lists the mass of DNA that is in each tube. Based on this information, complete the following table to create 100 uM stock primers for the 6 primers

Primer

Number of nucleotides

Mass (ug)

nMoles

H20 needed to create 100 uM stock

Polymerase Forward

20

206

Polymerase reverse

20

174

Sybr Forward

20

167

Sybr Reverse

20

231

TaqMan Forward

20

100

TaqMan Reverse

20

149

Homework Answers

Answer #1

Answer- The nmol of DNA can be determined by the formula ugDNA× pmol/660pg × 10^6pg/pmol × 1/N and then total divided by 1000

N- number of nucleotides

660pg/pmol- average weight of nucleotide.

Primer Nucleotide ug nmol
Polymerase F 20 206 15.60
Polymerase R 20 174 13.18
Sybr F 20 167 12.65
Sybr R 20 231 17.50
Taqman F 20 100 7.50
Taqman R 20 149 11.28

The dilution is done by multiplying the nmol of DNA by 10 and adding that amount of water.

So the amount of water that will be add to different primers are respectively from upside to down - 156, 131, 126, 175, 75, 112 ul of labgrade water.

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