Question

Based on the nature of the side chain, where would you expect to find polar versus...

Based on the nature of the side chain, where would you expect to find polar versus nonpolar amino acids?

Homework Answers

Answer #1

Amino acids contain an alpha amino group, an alpha carboxyl group, and a side chain.
Amino and carboxyl groups are involved in the peptide bond formation.

Amino acids with polar side chains: Arg, Lys, Asp, and Glu
Amino acids with non-polar side chains: Val, Leu, and Ile

Cellular environment is hydrophilic (Water is the major constituent of live cell -up to 80%-95%)
The hydrophilic environment can interact with hydrophilic groups. It repels hydrophobic groups.
So, proteins fold in such a way that most of their charged/polar amino acids are exposed to the external hydrophilic environment and hydrophobic amino acids buried inside the core.

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