Based on the nucleotide sequence below:
1. Write the nucleotide sequence for:
a. T7 promoter [2]
b. lac operator [2]
c. ribosomal binding site [2]
d. 6 x His tag [2]
e. NcoI restriction enzyme [2]
f. BamHI restriction enzyme [2]
g. EcoRI restriction enzyme [2]
h. HindIII restriction enzyme [2]
2. Write the amino acid sequence of the translated protein. [7]
3. Calculate the molecular weight of the protein translated. [2]
>RetroMAD
AGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTCCCCTCTAGAAATAATTTTGTTTAACTTTAAGAAGGAGATATACATATGAAATACCTGCTGCCGACCGCTGCTGCTGGTCTGCTGCTCCTCGCTGCCCAGCCGGCGATGGCCATGGGGCGTATTTGCCGTTGCATTTGCGGCCGTGGCATTTGCCGCTGCATCTGTGGCGTGCCGGGTGTTGGTGTTCCGGGTGTGGGTGGTGCGACCGGATCCGATGTGAACTTTGATCTGAGCACCGCGACCGCGAAAACCTATACCAAATTCATCGAAGATTTTCGTGCGACCCTGCCGTTTAGCCATAAAGTGTATGATATCCCGCTGCTGTATAGCACCATTAGCGATAGCCGTCGTTTTATTCTGCTGGATCTGACCAGCTATGCGTATGAAACCATTAGCGTGGCGATTGATGTGACCAACGTGTATGTGGTGGCGTATCGTACCCGTGATGTGAGCTACTTTTTCAAAGAAAGCCCGCCGGAAGCGTACAACATTCTGTTTAAAGGCACCCGTAAAATTACCCTGCCGTATACCGGCAACTATGAAAACCTGCAGACCGCGGCGCATAAAATTCGTGAAAACATCGATCTGGGCCTGCCGGCCCTGAGCAGCGCGATTACCACCCTGTTTTATTATAACGCGCAGAGCGCGCCGAGCGCGCTGCTGGTGCTGATTCAGACCACCGCGGAAGCGGCGCGTTTTAAATATATTGAACGCCACGTGGCGAAATATGTGGCGACCAACTTTAAACCGAACCTGGCCATTATTAGCCTGGAAAACCAGTGGAGCGCCCTGAGCAAACAAATTTTTCTGGCCCAGAACCAGGGCGGCAAATTTCGTAATCCGGTGGATCTGATTAAACCGACCGGCGAACGTTTTCAGGTGACCAATGTGGATAGCGATGTGGTGAAAGGCAACATTAAACTGCTGCTGAACAGCCGTGCGAGCACCGCGGATGAAAACTTTATTACCACCATGACCCTGCTGGGCGAAAGCGTGGTGGAATTCCCGTGGGCGCTGTGGAAAACCATGCTGAAAGAACTGGGCACGATGGCGCTGCATGCGGGTAAAGCGGCGCTGGGTGCGGCAGCGGATACCATTAGCCAGGGCACCCAGGTTCCGGGCGTGGGCGTTCCGGGCGTTGGTAAGCTTGCGGCCGCACTCGAGCACCACCACCACCACCACTGAGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTG
Question 1
a) T7 Promoter- 5' – TAATACGACTCACTATAG – 3'
b) lac operator-5′--T G G A A T T G T G A G C G G A T A A C A A T T -3′
c)ribosomal binding site- 5'- AAAGANNNGANNN -3'
d)6 x His tag- 5-'GTAGTAGTAGTAGTAGTA- 3'
e)NcoI Restriction enzyme - 5'-CCATGG- 3'
f)BamHI Restriction enzyme- 5'-GGATCC- 3'
g)EcoRI restriction enzyme - 5'-GAATTC- 3'
h)Hind III Restriction enzyme- 5'- AAGCTT- 3'
Question 2
DNA : TAC AAA GCT TCA GGC CCT GAT ATC
mRNA : AUG UUU CGA AGU CCG GGA CUA UAG
Amino
acids : Met Phe Arg Ser Pro Gly Lue Stop
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